RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g39760.1 View Network Show in Genome Browser |
| Other Names | Os09g0571100 |
| Description | pectinesterase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 22804668-22807049 Nucleotide Length: 1227 |
| Protein-coding | LOC_Os09g39760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g52870 LOC_Os02g33560 LOC_Os05g37120 LOC_Os04g35430 |
| Downstream Genes | LOC_Os09g39770 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 osa-miR5075 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00040 rn00500 rn01100 |
| Metacyc Pathways | PWY-1081 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g39760.1 |
| Rice Genome Annotation | LOC_Os09g39760.1 |
| Ricechip | LOC_Os09g39760.1 |
| KEGG | osa:4347918 dosa:Os09t0571100-01 |
| Entrez-Gene | 4347918 |