RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g39780.1 View Network Show in Genome Browser |
| Other Names | Os09g0571400 |
| Description | peptidyl-prolyl cis-trans isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 22809904-22811004 Nucleotide Length: 540 |
| Protein-coding | LOC_Os09g39780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g55880 LOC_Os02g27760 LOC_Os06g07210 LOC_Os03g63410 LOC_Os07g10720 LOC_Os08g01054 LOC_Os07g46180 LOC_Os07g08330 LOC_Os07g42950 LOC_Os07g22220 LOC_Os08g29370 More.. |
| Downstream Genes | LOC_Os10g32550 LOC_Os11g11390 LOC_Os11g38990 LOC_Os11g41610 LOC_Os12g38000 LOC_Os10g41410 LOC_Os10g43040 LOC_Os10g32920 LOC_Os12g38310 LOC_Os11g04070 LOC_Os12g03880 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g39780.1 |
| Rice Genome Annotation | LOC_Os09g39780.1 |
| Ricechip | LOC_Os09g39780.1 |
| KEGG | osa:4347920 dosa:Os09t0571400-01 |
| Entrez-Gene | 4347920 |