RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g01480.1 View Network Show in Genome Browser |
| Other Names | Os10g0103800 |
| Description | Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 301771-308113 Nucleotide Length: 1065 |
| Protein-coding | LOC_Os10g01480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g05980 LOC_Os05g28750 LOC_Os01g19840 LOC_Os03g31090 LOC_Os03g46490 LOC_Os04g35090 LOC_Os02g34460 LOC_Os07g31300 LOC_Os01g73160 LOC_Os03g41438 LOC_Os01g48210 More.. |
| Downstream Genes | LOC_Os11g38959 LOC_Os12g02730 LOC_Os11g13540 LOC_Os10g33630 LOC_Os11g13530 LOC_Os10g35280 LOC_Os10g27174 LOC_Os12g08070 LOC_Os11g02760 LOC_Os10g08550 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00562 rn01100 |
| Metacyc Pathways | PWY-6362 PWY-6554 PWY-6366 PWY-6365 |
| Reference | |
|---|---|
| PubMed | 22038091 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g01480.1 |
| Rice Genome Annotation | LOC_Os10g01480.1 |
| Ricechip | LOC_Os10g01480.1 |
| KEGG | osa:4347947 dosa:Os10t0103800-01 |
| Entrez-Gene | 4347947 |