RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g01560.1 View Network Show in Genome Browser |
| Other Names | Os10g0104800 |
| Description | serine/threonine-protein kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 372226-375691 Nucleotide Length: 1707 |
| Protein-coding | LOC_Os10g01560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os06g48300 LOC_Os07g32380 LOC_Os02g15594 LOC_Os06g33549 LOC_Os04g37904 LOC_Os02g55560 LOC_Os04g56450 LOC_Os03g18150 LOC_Os04g52000 LOC_Os06g44210 More.. |
| Downstream Genes | LOC_Os10g39540 LOC_Os10g26520 LOC_Os12g08070 LOC_Os11g13820 LOC_Os12g39120 LOC_Os11g02830 LOC_Os12g02810 LOC_Os10g25550 LOC_Os10g29620 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 osa-miR2120 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g01560.1 |
| Rice Genome Annotation | LOC_Os10g01560.1 |
| Ricechip | LOC_Os10g01560.1 |
| KEGG | osa:4347953 dosa:Os10t0104800-01 |
| Entrez-Gene | 4347953 |