RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g01920.1 View Network Show in Genome Browser |
| Other Names | Os10g0108700 |
| Description | transferase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 583024-584677 Nucleotide Length: 1305 |
| Protein-coding | LOC_Os10g01920 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g16260 LOC_Os07g32620 LOC_Os09g25850 LOC_Os01g01650 LOC_Os05g10210 LOC_Os06g21270 LOC_Os05g09704 LOC_Os05g13900 LOC_Os03g45619 LOC_Os09g32964 LOC_Os03g13200 More.. |
| Downstream Genes | LOC_Os12g10320 LOC_Os10g05970 LOC_Os12g37650 LOC_Os10g06000 LOC_Os10g05990 LOC_Os10g05980 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2094-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g01920.1 |
| Rice Genome Annotation | LOC_Os10g01920.1 |
| Ricechip | LOC_Os10g01920.1 |
| KEGG | osa:4347960 dosa:Os10t0108700-01 |
| Entrez-Gene | 4347960 |