RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g02584.1 View Network Show in Genome Browser |
| Other Names | Os10g0115200 |
| Description | GAGA-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 976451-978286 Nucleotide Length: 1026 |
| Protein-coding | LOC_Os10g02584 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g02509 LOC_Os03g03560 LOC_Os05g49470 LOC_Os07g15600 |
| Downstream Genes | LOC_Os10g02620 LOC_Os12g38440 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g02584.1 |
| Rice Genome Annotation | LOC_Os10g02584.1 |
| Ricechip | LOC_Os10g02584.1 |
| KEGG | osa:9268674 dosa:Os10t0115200-01 |
| Entrez-Gene | 9268674 |