RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g03540.1 View Network Show in Genome Browser |
| Other Names | Os10g0124000 |
| Description | ribosomal protein L7Ae, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 1530559-1532298 Nucleotide Length: 381 |
| Protein-coding | LOC_Os10g03540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g33050 LOC_Os07g19190 LOC_Os05g40820 LOC_Os07g12250 LOC_Os01g59990 LOC_Os05g41110 LOC_Os01g59730 LOC_Os06g48230 LOC_Os01g16890 LOC_Os03g22880 LOC_Os07g30970 More.. |
| Downstream Genes | LOC_Os10g27174 LOC_Os10g41410 LOC_Os12g36194 LOC_Os11g29190 LOC_Os11g08940 LOC_Os11g06750 LOC_Os11g38959 LOC_Os12g07010 LOC_Os12g32240 LOC_Os11g11390 LOC_Os12g21798 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g03540.1 |
| Rice Genome Annotation | LOC_Os10g03540.1 |
| Ricechip | LOC_Os10g03540.1 |
| KEGG | osa:4348007 dosa:Os10t0124000-01 |
| Entrez-Gene | 4348007 |