RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g04580.1 View Network Show in Genome Browser |
| Other Names | Os10g0135200 |
| Description | ras-related protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 2178608-2183194 Nucleotide Length: 1032 |
| Protein-coding | LOC_Os10g04580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g33850 LOC_Os03g59590 LOC_Os01g27730 LOC_Os08g10649 LOC_Os08g31460 LOC_Os03g60180 LOC_Os02g06340 LOC_Os03g19870 LOC_Os03g44530 LOC_Os06g47330 LOC_Os01g69130 More.. |
| Downstream Genes | LOC_Os11g38020 LOC_Os12g42370 LOC_Os11g26030 LOC_Os11g47800 LOC_Os10g42170 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g04580.1 |
| Rice Genome Annotation | LOC_Os10g04580.1 |
| Ricechip | LOC_Os10g04580.1 |
| KEGG | osa:4348056 dosa:Os10t0135200-01 |
| Entrez-Gene | 4348056 |