RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g04674.1 View Network Show in Genome Browser |
| Other Names | Os10g0136100 |
| Description | disease resistance protein RPM1, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 2226402-2231401 Nucleotide Length: 2784 |
| Protein-coding | LOC_Os10g04674 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g34770 LOC_Os07g34520 LOC_Os06g43680 |
| Downstream Genes | LOC_Os12g37690 LOC_Os11g29370 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2118e osa-miR2118p osa-miR2118r |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g04674.1 |
| Rice Genome Annotation | LOC_Os10g04674.1 |
| Ricechip | LOC_Os10g04674.1 |
| KEGG | osa:4348062 dosa:Os10t0136100-02 |
| Entrez-Gene | 4348062 |