RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g05230.2 View Network Show in Genome Browser |
| Other Names | Os10g0142100 |
| Description | zinc finger, C3HC4 type domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 2567425-2572064 Nucleotide Length: 471 |
| Protein-coding | LOC_Os10g05230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g39880 LOC_Os08g34984 LOC_Os02g03760 LOC_Os01g01450 LOC_Os06g20430 LOC_Os03g07190 |
| Downstream Genes | LOC_Os11g06020 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR159f osa-miR159a.1 osa-miR159b osa-miR159c |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g05230.2 |
| Rice Genome Annotation | LOC_Os10g05230.2 |
| Ricechip | LOC_Os10g05230.2 |
| KEGG | osa:4348088 dosa:Os10t0142100-01 |
| Entrez-Gene | 4348088 |