RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g05600.1 View Network Show in Genome Browser |
| Other Names | Os10g0146200 |
| Description | thaumatin-like protein 1 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 2794499-2796678 Nucleotide Length: 1170 |
| Protein-coding | LOC_Os10g05600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g28630 LOC_Os03g21730 LOC_Os07g14070 LOC_Os07g14030 LOC_Os07g03730 LOC_Os02g27300 LOC_Os01g28450 LOC_Os05g34800 LOC_Os07g03710 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g05600.1 |
| Rice Genome Annotation | LOC_Os10g05600.1 |
| Ricechip | LOC_Os10g05600.1 |
| KEGG | osa:4348103 dosa:Os10t0146200-01 |
| Entrez-Gene | 4348103 |