RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g06630.1 View Network Show in Genome Browser |
| Other Names | Os10g0154700 |
| Description | peptidyl-prolyl cis-trans isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 3438472-3439486 Nucleotide Length: 546 |
| Protein-coding | LOC_Os10g06630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g37190 LOC_Os02g43540 LOC_Os09g36670 LOC_Os02g10970 LOC_Os01g02080 LOC_Os01g67040 LOC_Os03g53020 LOC_Os03g44830 LOC_Os08g19610 LOC_Os05g45070 LOC_Os08g29370 More.. |
| Downstream Genes | LOC_Os11g38990 LOC_Os12g38860 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g06630.1 |
| Rice Genome Annotation | LOC_Os10g06630.1 |
| Ricechip | LOC_Os10g06630.1 |
| KEGG | osa:4348134 dosa:Os10t0154700-01 |
| Entrez-Gene | 4348134 |