RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g07994.1 View Network Show in Genome Browser |
| Other Names | Os10g0163100 |
| Description | autophagy protein 9, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 4281000-4286574 Nucleotide Length: 2784 |
| Protein-coding | LOC_Os10g07994 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g54910 LOC_Os03g39000 LOC_Os08g33082 LOC_Os03g39710 LOC_Os01g38670 LOC_Os02g44690 LOC_Os09g30150 LOC_Os06g18830 LOC_Os01g38680 LOC_Os05g27940 LOC_Os03g18570 More.. |
| Downstream Genes | LOC_Os11g34350 LOC_Os10g40780 LOC_Os12g42370 LOC_Os10g27230 LOC_Os11g38959 LOC_Os10g41960 LOC_Os12g09000 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6248 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-3781 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g07994.1 |
| Rice Genome Annotation | LOC_Os10g07994.1 |
| Ricechip | LOC_Os10g07994.1 |
| KEGG | dosa:Os10t0163100-01 |