RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g08930.1 View Network Show in Genome Browser |
| Other Names | Os10g0170200 |
| Description | S10/S20 domain containing ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 4832054-4835136 Nucleotide Length: 393 |
| Protein-coding | LOC_Os10g08930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g28180 LOC_Os05g06770 LOC_Os04g50990 LOC_Os01g59990 LOC_Os02g47140 LOC_Os07g12250 LOC_Os02g28810 LOC_Os03g22180 LOC_Os01g22490 LOC_Os05g40820 LOC_Os07g47780 More.. |
| Downstream Genes | LOC_Os11g29190 LOC_Os11g05562 LOC_Os12g38000 LOC_Os10g27174 LOC_Os11g24610 LOC_Os11g06750 LOC_Os11g11390 LOC_Os12g21798 LOC_Os12g07010 LOC_Os12g03880 LOC_Os11g04070 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g08930.1 |
| Rice Genome Annotation | LOC_Os10g08930.1 |
| Ricechip | LOC_Os10g08930.1 |
| KEGG | osa:4348185 dosa:Os10t0170200-01 |
| Entrez-Gene | 4348185 |