RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g08940.1 View Network Show in Genome Browser |
| Other Names | Os10g0170300 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 4835885-4842278 Nucleotide Length: 2859 |
| Protein-coding | LOC_Os10g08940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48980 LOC_Os02g46350 LOC_Os02g12740 LOC_Os01g67960 LOC_Os01g19470 LOC_Os01g64990 LOC_Os01g10020 LOC_Os05g22940 LOC_Os04g14760 |
| Downstream Genes | LOC_Os11g28980 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g08940.1 |
| Rice Genome Annotation | LOC_Os10g08940.1 |
| Ricechip | LOC_Os10g08940.1 |
| KEGG | osa:4348186 dosa:Os10t0170300-01 |
| Entrez-Gene | 4348186 |