RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g09870.1 View Network Show in Genome Browser |
| Other Names | Os10g0177400 |
| Description | HVA22, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 5340966-5346885 Nucleotide Length: 1047 |
| Protein-coding | LOC_Os10g09870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g74170 LOC_Os01g56320 LOC_Os05g34800 LOC_Os01g42040 LOC_Os03g01530 LOC_Os09g27060 LOC_Os02g37430 LOC_Os05g41080 LOC_Os06g30440 LOC_Os08g32500 LOC_Os05g11750 More.. |
| Downstream Genes | LOC_Os12g39210 LOC_Os12g41230 LOC_Os10g30640 LOC_Os10g20650 LOC_Os10g35690 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR529a |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g09870.1 |
| Rice Genome Annotation | LOC_Os10g09870.1 |
| Ricechip | LOC_Os10g09870.1 |
| KEGG | osa:4348198 dosa:Os10t0177400-02 |
| Entrez-Gene | 4348198 |