RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g10080.1 View Network Show in Genome Browser |
| Other Names | Os10g0180000 |
| Description | exostosin family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 5487008-5490456 Nucleotide Length: 1254 |
| Protein-coding | LOC_Os10g10080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g06580 LOC_Os06g11490 LOC_Os02g22380 LOC_Os01g57570 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5820 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00970 |
| Metacyc Pathways | TRNA-CHARGING-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g10080.1 |
| Rice Genome Annotation | LOC_Os10g10080.1 |
| Ricechip | LOC_Os10g10080.1 |
| KEGG | osa:4348204 dosa:Os10t0180000-01 |
| Entrez-Gene | 4348204 |