RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g10170.1 View Network Show in Genome Browser |
| Other Names | Os10g0181200 |
| Description | PPR repeat domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 5577466-5584942 Nucleotide Length: 2793 |
| Protein-coding | LOC_Os10g10170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g06300 LOC_Os04g51792 LOC_Os02g22260 LOC_Os04g42870 LOC_Os05g33520 LOC_Os03g39830 LOC_Os03g48040 LOC_Os02g38820 LOC_Os02g15900 LOC_Os08g07060 LOC_Os06g49160 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1857-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g10170.1 |
| Rice Genome Annotation | LOC_Os10g10170.1 |
| Ricechip | LOC_Os10g10170.1 |
| KEGG | osa:4348208 dosa:Os10t0181200-01 |
| Entrez-Gene | 4348208 |