RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g11034.1 View Network Show in Genome Browser |
| Other Names | Os10g0188300 |
| Description | caffeine-induced death protein 1, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 6104485-6110305 Nucleotide Length: 963 |
| Protein-coding | LOC_Os10g11034 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g21470 LOC_Os03g60110 LOC_Os03g11240 LOC_Os07g12490 LOC_Os05g40290 LOC_Os06g36360 LOC_Os01g60260 LOC_Os01g66300 LOC_Os05g34670 LOC_Os02g39720 LOC_Os06g46400 More.. |
| Downstream Genes | LOC_Os10g29560 LOC_Os10g39820 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g11034.1 |
| Rice Genome Annotation | LOC_Os10g11034.1 |
| Ricechip | LOC_Os10g11034.1 |
| KEGG | osa:4348226 dosa:Os10t0188300-01 |
| Entrez-Gene | 4348226 |