RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g11140.2 View Network Show in Genome Browser |
| Other Names | Os10g0189100 |
| Description | phosphoglucomutase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 6167111-6174631 Nucleotide Length: 1674 |
| Protein-coding | LOC_Os10g11140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009605 | response to external stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g09460 LOC_Os07g09720 LOC_Os01g74000 LOC_Os09g38030 LOC_Os05g09500 LOC_Os04g01600 LOC_Os02g03100 LOC_Os05g45590 LOC_Os08g36320 LOC_Os03g51080 LOC_Os02g02560 More.. |
| Downstream Genes | LOC_Os11g17610 LOC_Os11g44940 LOC_Os11g47760 LOC_Os12g43740 LOC_Os10g42250 LOC_Os10g37660 LOC_Os10g41930 LOC_Os12g37060 LOC_Os11g08300 LOC_Os11g01510 LOC_Os12g01520 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g11140.2 |
| Rice Genome Annotation | LOC_Os10g11140.2 |
| Ricechip | LOC_Os10g11140.2 |
| KEGG | osa:4348230 dosa:Os10t0189100-01 |
| Entrez-Gene | 4348230 |