RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g13670.1 View Network Show in Genome Browser |
| Other Names | Os10g0204100 |
| Description | Zinc finger, C3HC4 type domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 7414289-7419609 Nucleotide Length: 1278 |
| Protein-coding | LOC_Os10g13670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g25090 LOC_Os01g74180 LOC_Os03g18890 LOC_Os06g24540 LOC_Os01g55360 LOC_Os04g58330 LOC_Os01g21990 LOC_Os03g05020 LOC_Os03g18870 LOC_Os06g30310 LOC_Os04g44650 More.. |
| Downstream Genes | LOC_Os12g01449 LOC_Os11g01439 LOC_Os10g35180 LOC_Os12g42850 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g13670.1 |
| Rice Genome Annotation | LOC_Os10g13670.1 |
| Ricechip | LOC_Os10g13670.1 |
| KEGG | osa:4348266 dosa:Os10t0204100-01 |
| Entrez-Gene | 4348266 |