RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g13700.2 View Network Show in Genome Browser |
| Other Names | Os10g0204400 |
| Description | phosphoenolpyruvate carboxykinase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 7438335-7444108 Nucleotide Length: 1605 |
| Protein-coding | LOC_Os10g13700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g64660 LOC_Os05g36270 LOC_Os08g33082 LOC_Os07g34520 LOC_Os04g40990 LOC_Os04g35700 LOC_Os02g35010 LOC_Os01g16900 LOC_Os02g38200 LOC_Os09g39500 LOC_Os03g13170 More.. |
| Downstream Genes | LOC_Os11g10100 LOC_Os12g03720 LOC_Os11g03900 LOC_Os12g35630 LOC_Os11g33240 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00010 rn00020 rn00620 rn00710 rn01100 rn01110 rn01120 |
| Metacyc Pathways | GLUCONEO-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g13700.2 |
| Rice Genome Annotation | LOC_Os10g13700.2 |
| Ricechip | LOC_Os10g13700.2 |
| KEGG | osa:4348268 dosa:Os10t0204400-01 |
| Entrez-Gene | 4348268 |