RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g13810.1 View Network Show in Genome Browser |
| Other Names | Os10g0205300 |
| Description | glycosyltransferase family 43 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 7499315-7503453 Nucleotide Length: 1056 |
| Protein-coding | LOC_Os10g13810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g40030 LOC_Os03g16980 LOC_Os03g42020 LOC_Os03g10640 LOC_Os01g21320 LOC_Os01g62020 LOC_Os07g47700 LOC_Os05g29990 LOC_Os03g17230 LOC_Os08g02140 LOC_Os08g18110 More.. |
| Downstream Genes | LOC_Os12g39660 LOC_Os12g21500 LOC_Os12g04220 LOC_Os11g04460 LOC_Os12g38630 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2871a-3p osa-miR2871b |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g13810.1 |
| Rice Genome Annotation | LOC_Os10g13810.1 |
| Ricechip | LOC_Os10g13810.1 |
| KEGG | osa:4348270 dosa:Os10t0205300-01 |
| Entrez-Gene | 4348270 |