RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g17454.2 View Network Show in Genome Browser |
| Other Names | Os10g0321700 |
| Description | RNA recognition motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 8786948-8796519 Nucleotide Length: 954 |
| Protein-coding | LOC_Os10g17454 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g48710 LOC_Os03g52490 LOC_Os08g39820 LOC_Os07g10250 LOC_Os05g51500 LOC_Os09g02700 LOC_Os01g43030 LOC_Os03g59050 LOC_Os09g19560 LOC_Os01g14980 LOC_Os05g30530 More.. |
| Downstream Genes | LOC_Os12g31800 LOC_Os11g41890 LOC_Os12g07300 LOC_Os12g06910 LOC_Os11g38670 LOC_Os11g37080 LOC_Os11g04070 LOC_Os12g03880 LOC_Os10g33770 LOC_Os11g03794 LOC_Os11g29190 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g17454.2 |
| Rice Genome Annotation | LOC_Os10g17454.2 |
| Ricechip | LOC_Os10g17454.2 |
| KEGG | osa:4348309 dosa:Os10t0321700-01 |
| Entrez-Gene | 4348309 |