RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g18150.1 View Network Show in Genome Browser |
| Other Names | Os10g0328700 |
| Description | crooked neck, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 9212937-9215332 Nucleotide Length: 2136 |
| Protein-coding | LOC_Os10g18150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g28090 LOC_Os07g44970 LOC_Os03g21990 LOC_Os02g52250 LOC_Os03g27970 LOC_Os05g07050 LOC_Os02g04480 LOC_Os03g50850 LOC_Os06g12910 LOC_Os02g05310 LOC_Os02g01740 More.. |
| Downstream Genes | LOC_Os12g15420 LOC_Os12g42140 LOC_Os12g05410 LOC_Os10g34380 LOC_Os11g05394 LOC_Os10g35550 LOC_Os11g18170 LOC_Os10g34520 LOC_Os10g27190 LOC_Os12g37400 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g18150.1 |
| Rice Genome Annotation | LOC_Os10g18150.1 |
| Ricechip | LOC_Os10g18150.1 |
| KEGG | osa:4348330 dosa:Os10t0328700-01 |
| Entrez-Gene | 4348330 |