RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g18400.1 View Network Show in Genome Browser |
| Other Names | Os10g0330600 |
| Description | beta-galactosidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 9349051-9356434 Nucleotide Length: 2487 |
| Protein-coding | LOC_Os10g18400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g56940 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2092-3p |
| Pathways | |
|---|---|
| KEGG Pathways | rn00052 rn00531 rn00604 rn01100 rn00511 rn00600 |
| Metacyc Pathways | LACTOSEUTIL-PWY BGALACT-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g18400.1 |
| Rice Genome Annotation | LOC_Os10g18400.1 |
| Ricechip | LOC_Os10g18400.1 |
| KEGG | osa:4348337 dosa:Os10t0330600-01 |
| Entrez-Gene | 4348337 |