RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g20240.1 View Network Show in Genome Browser |
| Other Names | Os10g0343100 |
| Description | syntaxin 6, N-terminal domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 10170489-10174474 Nucleotide Length: 1104 |
| Protein-coding | LOC_Os10g20240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g44810 LOC_Os01g08510 LOC_Os02g05490 LOC_Os05g48620 LOC_Os05g16640 LOC_Os07g07000 LOC_Os06g39050 LOC_Os06g02570 LOC_Os03g57310 LOC_Os03g52650 LOC_Os05g07980 More.. |
| Downstream Genes | LOC_Os12g35620 LOC_Os12g09089 LOC_Os10g23220 LOC_Os10g42690 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g20240.1 |
| Rice Genome Annotation | LOC_Os10g20240.1 |
| Ricechip | LOC_Os10g20240.1 |
| KEGG | osa:4348362 dosa:Os10t0343100-01 |
| Entrez-Gene | 4348362 |