RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g20630.1 View Network Show in Genome Browser |
| Other Names | Os10g0346600 |
| Description | vacuolar-sorting receptor precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 10411144-10418511 Nucleotide Length: 1896 |
| Protein-coding | LOC_Os10g20630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g07820 LOC_Os03g52150 LOC_Os02g41500 LOC_Os01g26174 LOC_Os02g58730 LOC_Os02g20850 LOC_Os03g47500 LOC_Os06g07830 LOC_Os02g55970 LOC_Os02g02840 LOC_Os02g50860 More.. |
| Downstream Genes | LOC_Os12g43930 LOC_Os12g07670 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g20630.1 |
| Rice Genome Annotation | LOC_Os10g20630.1 |
| Ricechip | LOC_Os10g20630.1 |
| KEGG | osa:4348376 dosa:Os10t0346600-00 |
| Entrez-Gene | 4348376 |