RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os10g20990.1 View Network Show in Genome Browser
Other Names	Os10g0350450,Os10g0350200,Os10g0350400
Description	ribosomal protein S12 containing protein, expressed
Gene Attributes	Chromosome: Chr10 CDS Coordinates (5'-3'): 10625908-10630239 Nucleotide Length: 1686
Protein-coding	LOC_Os10g20990

Gene Ontology Classification
GO	Name	Type	Code
GO:0006412	translation	Biological Process	IEA
GO:0006412	translation	Biological Process	IEA
GO:0006412	translation	Biological Process	IEA
GO:0005198	structural molecule activity	Molecular Function	IEA
GO:0005198	structural molecule activity	Molecular Function	IEA
GO:0005198	structural molecule activity	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005840	ribosome	Cellular Component	IEA
GO:0005840	ribosome	Cellular Component	IEA
GO:0005840	ribosome	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os04g41490 LOC_Os06g40950 LOC_Os01g73430 LOC_Os03g44484 LOC_Os04g48370 LOC_Os04g54840 LOC_Os03g28960 LOC_Os05g05860 LOC_Os08g07480 LOC_Os05g41110 LOC_Os01g59730 More..
Downstream Genes	LOC_Os11g29190 LOC_Os12g01710 LOC_Os10g35290 LOC_Os11g04730 LOC_Os12g04510 LOC_Os11g01980 LOC_Os10g29660 LOC_Os11g11390 LOC_Os12g39070 LOC_Os12g21798 LOC_Os10g28640 More..

miRNA Regulations
miRNAs	osa-miR169a osa-miR169b osa-miR169c osa-miR169f.1 osa-miR169g osa-miR169e

Database Links
Gramene	LOC_Os10g20990.1
Rice Genome Annotation	LOC_Os10g20990.1
Ricechip	LOC_Os10g20990.1
KEGG	osa:4348383 dosa:Os10t0350450-00 dosa:Os10t0350200-00