RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g23220.1 View Network Show in Genome Browser |
| Other Names | Os10g0378400 |
| Description | GIL1, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 12113431-12116333 Nucleotide Length: 1269 |
| Protein-coding | LOC_Os10g23220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g20240 LOC_Os08g14640 LOC_Os04g44810 LOC_Os01g08510 LOC_Os03g50340 LOC_Os03g52780 LOC_Os09g04110 LOC_Os04g45190 |
| Downstream Genes | LOC_Os12g35620 LOC_Os12g09089 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR172d-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g23220.1 |
| Rice Genome Annotation | LOC_Os10g23220.1 |
| Ricechip | LOC_Os10g23220.1 |
| KEGG | osa:4348500 dosa:Os10t0378400-01 |
| Entrez-Gene | 4348500 |