RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g25010.1 View Network Show in Genome Browser |
| Other Names | Os10g0389000 |
| Description | OsCML8 - Calmodulin-related calcium sensor protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 12870885-12874087 Nucleotide Length: 576 |
| Protein-coding | LOC_Os10g25010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g48780 LOC_Os05g41210 LOC_Os03g20370 LOC_Os01g16240 LOC_Os01g17190 LOC_Os02g10740 LOC_Os03g59590 LOC_Os06g40200 LOC_Os01g59530 LOC_Os01g62570 LOC_Os03g50510 More.. |
| Downstream Genes | LOC_Os12g37560 LOC_Os12g29660 LOC_Os12g06510 LOC_Os12g40510 LOC_Os12g03816 LOC_Os10g35990 LOC_Os10g41510 LOC_Os11g38670 LOC_Os12g42876 LOC_Os12g42884 LOC_Os10g39620 More.. |
| Reference | |
|---|---|
| PubMed | 17263873 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g25010.1 |
| Rice Genome Annotation | LOC_Os10g25010.1 |
| Ricechip | LOC_Os10g25010.1 |
| KEGG | osa:4348517 dosa:Os10t0389000-01 |
| Entrez-Gene | 4348517 |