RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g25030.1 View Network Show in Genome Browser |
| Other Names | Os10g0389200 |
| Description | red chlorophyll catabolite reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 12886331-12888302 Nucleotide Length: 990 |
| Protein-coding | LOC_Os10g25030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g31490 LOC_Os01g52010 LOC_Os03g05310 LOC_Os01g51980 LOC_Os09g04440 LOC_Os03g04770 LOC_Os06g24730 LOC_Os07g46570 LOC_Os09g12540 LOC_Os02g45670 LOC_Os01g01160 More.. |
| Downstream Genes | LOC_Os12g32970 LOC_Os10g31000 LOC_Os12g32250 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g25030.1 |
| Rice Genome Annotation | LOC_Os10g25030.1 |
| Ricechip | LOC_Os10g25030.1 |
| KEGG | osa:4348519 dosa:Os10t0389200-01 |
| Entrez-Gene | 4348519 |