RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g25110.1 View Network Show in Genome Browser |
| Other Names | Os10g0390100 |
| Description | pumilio-family RNA binding repeat containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 12940627-12946748 Nucleotide Length: 2520 |
| Protein-coding | LOC_Os10g25110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18410 LOC_Os03g52470 LOC_Os07g10350 LOC_Os06g40120 LOC_Os03g61200 LOC_Os05g51490 LOC_Os01g40340 LOC_Os06g01980 LOC_Os04g52200 LOC_Os03g05720 LOC_Os02g50370 More.. |
| Downstream Genes | LOC_Os12g29660 LOC_Os12g36950 LOC_Os11g19250 LOC_Os12g03822 LOC_Os11g03990 LOC_Os11g07500 LOC_Os12g04010 LOC_Os12g31000 LOC_Os10g35280 LOC_Os12g09280 LOC_Os11g04200 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g25110.1 |
| Rice Genome Annotation | LOC_Os10g25110.1 |
| Ricechip | LOC_Os10g25110.1 |
| KEGG | osa:4348523 dosa:Os10t0390100-02 |
| Entrez-Gene | 4348523 |