RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g25230.1 View Network Show in Genome Browser |
| Other Names | Os10g0391400 |
| Description | ZIM domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 13030986-13032006 Nucleotide Length: 501 |
| Protein-coding | LOC_Os10g25230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g08330 LOC_Os08g36920 LOC_Os03g52410 LOC_Os02g08440 LOC_Os04g43680 LOC_Os06g44010 LOC_Os03g01740 LOC_Os07g36170 |
| Downstream Genes | LOC_Os11g05380 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR812a osa-miR812b osa-miR812c osa-miR812d osa-miR812e osa-miR812s |
| Reference | |
|---|---|
| PubMed | 19618278 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g25230.1 |
| Rice Genome Annotation | LOC_Os10g25230.1 |
| Ricechip | LOC_Os10g25230.1 |
| KEGG | osa:4348531 dosa:Os10t0391400-01 |
| Entrez-Gene | 4348531 |