RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os10g25320.1 View Network Show in Genome Browser
Other Names	Os10g0392650,Os10g0392700
Description	initiation factor 2 subunit family domain containing protein, expressed
Gene Attributes	Chromosome: Chr10 CDS Coordinates (5'-3'): 13090534-13096750 Nucleotide Length: 1248
Protein-coding	LOC_Os10g25320

Gene Ontology Classification
GO	Name	Type	Code
GO:0008152	metabolic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006412	translation	Biological Process	IEA
GO:0006412	translation	Biological Process	IEA
GO:0030234	enzyme regulator activity	Molecular Function	IEA
GO:0030234	enzyme regulator activity	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0008135	translation factor activity, nucleic acid binding	Molecular Function	IEA
GO:0008135	translation factor activity, nucleic acid binding	Molecular Function	IEA
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0005737	cytoplasm	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g44310 LOC_Os02g56740 LOC_Os03g18510 LOC_Os03g21550 LOC_Os07g48300 LOC_Os07g49220 LOC_Os01g03070 LOC_Os03g40400 LOC_Os04g02820 LOC_Os02g32030 LOC_Os03g10340 More..
Downstream Genes	LOC_Os12g31380 LOC_Os12g42260 LOC_Os12g41400 LOC_Os12g07740 LOC_Os11g11050 LOC_Os12g21798 LOC_Os11g05562 LOC_Os10g27190 LOC_Os10g27174 LOC_Os11g29190 LOC_Os11g38959 More..

Database Links
Gramene	LOC_Os10g25320.1
Rice Genome Annotation	LOC_Os10g25320.1
Ricechip	LOC_Os10g25320.1
KEGG	osa:4348536 dosa:Os10t0392650-00 dosa:Os10t0392700-02