RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g26050.4 View Network Show in Genome Browser |
| Other Names | Os10g0400100 |
| Description | methionyl-tRNA synthetase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 13492785-13496772 Nucleotide Length: 1416 |
| Protein-coding | LOC_Os10g26050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g38520 LOC_Os01g62350 LOC_Os01g52170 LOC_Os03g42880 LOC_Os07g39870 LOC_Os08g05840 LOC_Os03g49580 LOC_Os06g43760 LOC_Os05g28750 LOC_Os01g19840 LOC_Os02g38900 More.. |
| Downstream Genes | LOC_Os12g35570 LOC_Os10g36210 LOC_Os11g10100 LOC_Os12g07350 LOC_Os10g28640 LOC_Os10g34670 LOC_Os12g06510 LOC_Os10g41370 LOC_Os10g32550 LOC_Os11g35390 LOC_Os12g03090 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g26050.4 |
| Rice Genome Annotation | LOC_Os10g26050.4 |
| Ricechip | LOC_Os10g26050.4 |
| KEGG | osa:4348562 dosa:Os10t0400100-01 |
| Entrez-Gene | 4348562 |