RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g26130.2 View Network Show in Genome Browser |
| Other Names | Os10g0400800 |
| Description | phenylalanyl-tRNA synthetase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 13537545-13542463 Nucleotide Length: 1383 |
| Protein-coding | LOC_Os10g26130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g48510 LOC_Os01g53280 LOC_Os05g45220 LOC_Os02g01110 LOC_Os06g43900 LOC_Os02g55120 LOC_Os08g45010 LOC_Os08g19850 LOC_Os05g48310 LOC_Os07g43470 LOC_Os01g19840 More.. |
| Downstream Genes | LOC_Os12g07740 LOC_Os12g41400 LOC_Os10g42860 LOC_Os11g37510 LOC_Os12g07820 LOC_Os12g21798 LOC_Os12g43600 LOC_Os12g30490 LOC_Os10g36210 LOC_Os11g29400 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g26130.2 |
| Rice Genome Annotation | LOC_Os10g26130.2 |
| Ricechip | LOC_Os10g26130.2 |
| KEGG | osa:4348566 dosa:Os10t0400800-01 |
| Entrez-Gene | 4348566 |