RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g26500.1 View Network Show in Genome Browser |
| Other Names | Os10g0404900 |
| Description | homeobox associated leucine zipper, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 13804811-13806732 Nucleotide Length: 1068 |
| Protein-coding | LOC_Os10g26500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g12860 LOC_Os02g58730 LOC_Os02g20850 LOC_Os02g02840 LOC_Os02g50860 LOC_Os06g12790 LOC_Os10g01470 LOC_Os08g36220 LOC_Os09g27450 LOC_Os04g46350 LOC_Os06g48290 More.. |
| Downstream Genes | LOC_Os10g41230 LOC_Os10g39720 LOC_Os12g35360 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g26500.1 |
| Rice Genome Annotation | LOC_Os10g26500.1 |
| Ricechip | LOC_Os10g26500.1 |
| KEGG | osa:4348578 dosa:Os10t0404900-01 |
| Entrez-Gene | 4348578 |