RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g26520.1 View Network Show in Genome Browser |
| Other Names | Os10g0405100 |
| Description | protein kinase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 13823476-13829535 Nucleotide Length: 1287 |
| Protein-coding | LOC_Os10g26520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g12680 LOC_Os05g23950 LOC_Os02g39290 LOC_Os04g14190 LOC_Os01g12720 LOC_Os04g14110 LOC_Os06g48300 LOC_Os02g05630 LOC_Os07g32380 LOC_Os02g15594 LOC_Os06g33549 More.. |
| Downstream Genes | LOC_Os12g08070 LOC_Os10g39540 LOC_Os10g41480 LOC_Os12g01740 LOC_Os11g01740 LOC_Os10g35450 LOC_Os10g38920 LOC_Os11g14050 LOC_Os12g10740 LOC_Os12g41710 LOC_Os11g13820 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1851 osa-miR5157a-5p osa-miR5157b-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g26520.1 |
| Rice Genome Annotation | LOC_Os10g26520.1 |
| Ricechip | LOC_Os10g26520.1 |
| KEGG | osa:4348579 dosa:Os10t0405100-02 |
| Entrez-Gene | 4348579 |