RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g26600.1 View Network Show in Genome Browser |
| Other Names | Os10g0406100 |
| Description | soluble inorganic pyrophosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 13867134-13869232 Nucleotide Length: 615 |
| Protein-coding | LOC_Os10g26600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g08950 LOC_Os01g10470 LOC_Os08g12520 LOC_Os07g13440 LOC_Os02g03510 LOC_Os05g51900 LOC_Os07g14340 LOC_Os02g26290 LOC_Os06g49860 LOC_Os03g01650 LOC_Os03g01610 More.. |
| Downstream Genes | LOC_Os11g43640 LOC_Os12g28177 LOC_Os12g28137 |
| Pathways | |
|---|---|
| Metacyc Pathways | P61-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g26600.1 |
| Rice Genome Annotation | LOC_Os10g26600.1 |
| Ricechip | LOC_Os10g26600.1 |
| KEGG | osa:4348583 dosa:Os10t0406100-01 |
| Entrez-Gene | 4348583 |