RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g28030.2 View Network Show in Genome Browser |
| Other Names | Os10g0415800 |
| Description | OsPOP22 - Putative Prolyl Oligopeptidase homologue, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 14543516-14549011 Nucleotide Length: 2316 |
| Protein-coding | LOC_Os10g28030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g52370 LOC_Os01g12800 LOC_Os07g08170 LOC_Os01g62040 LOC_Os01g51010 LOC_Os01g01830 LOC_Os06g51410 LOC_Os02g30310 LOC_Os04g47360 LOC_Os03g52400 LOC_Os04g47120 More.. |
| Downstream Genes | LOC_Os11g05570 LOC_Os12g04160 LOC_Os11g04370 LOC_Os10g41960 LOC_Os11g33240 LOC_Os10g30580 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g28030.2 |
| Rice Genome Annotation | LOC_Os10g28030.2 |
| Ricechip | LOC_Os10g28030.2 |
| KEGG | osa:4348628 dosa:Os10t0415800-01 |
| Entrez-Gene | 4348628 |