RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g28360.1 View Network Show in Genome Browser |
| Other Names | Os10g0419500 |
| Description | 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 14757124-14759781 Nucleotide Length: 555 |
| Protein-coding | LOC_Os10g28360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g02630 LOC_Os01g01120 LOC_Os03g56280 LOC_Os06g21600 LOC_Os06g09570 LOC_Os07g01920 LOC_Os04g36760 |
| Downstream Genes | LOC_Os11g29370 LOC_Os11g18880 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g28360.1 |
| Rice Genome Annotation | LOC_Os10g28360.1 |
| Ricechip | LOC_Os10g28360.1 |
| KEGG | osa:4348647 dosa:Os10t0419500-01 |
| Entrez-Gene | 4348647 |