RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g29560.1 View Network Show in Genome Browser |
| Other Names | Os10g0431000 |
| Description | transposon protein, putative, CACTA, En/Spm sub-class, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 15360564-15369094 Nucleotide Length: 2751 |
| Protein-coding | LOC_Os10g29560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72220 LOC_Os05g46570 LOC_Os09g39590 LOC_Os04g18010 LOC_Os06g21470 LOC_Os03g63590 LOC_Os03g16110 LOC_Os01g14610 LOC_Os05g13300 LOC_Os07g40030 LOC_Os08g03390 More.. |
| Downstream Genes | LOC_Os12g07050 LOC_Os10g39820 LOC_Os12g38380 LOC_Os10g37060 LOC_Os12g38000 LOC_Os12g43600 LOC_Os11g07490 LOC_Os11g32960 LOC_Os11g43640 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g29560.1 |
| Rice Genome Annotation | LOC_Os10g29560.1 |
| Ricechip | LOC_Os10g29560.1 |
| KEGG | osa:4348695 dosa:Os10t0431000-03 |
| Entrez-Gene | 4348695 |