RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g30090.1 View Network Show in Genome Browser |
| Other Names | Os10g0437100 |
| Description | amino acid permease, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 15629313-15635900 Nucleotide Length: 1869 |
| Protein-coding | LOC_Os10g30090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g39240 LOC_Os01g61550 LOC_Os01g61510 LOC_Os01g42234 LOC_Os09g38530 LOC_Os03g45170 LOC_Os03g12290 LOC_Os07g25440 LOC_Os01g65000 LOC_Os03g51050 LOC_Os03g62200 More.. |
| Downstream Genes | LOC_Os11g05690 LOC_Os10g31520 LOC_Os12g06060 LOC_Os12g42850 LOC_Os11g24560 LOC_Os12g37360 LOC_Os10g41930 LOC_Os11g34860 LOC_Os12g01420 LOC_Os11g42160 LOC_Os12g42370 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g30090.1 |
| Rice Genome Annotation | LOC_Os10g30090.1 |
| Ricechip | LOC_Os10g30090.1 |
| KEGG | osa:4348708 dosa:Os10t0437100-01 |
| Entrez-Gene | 4348708 |