RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g30100.1 View Network Show in Genome Browser |
| Other Names | Os10g0437200 |
| Description | 3-5 exonuclease family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 15637903-15644365 Nucleotide Length: 2709 |
| Protein-coding | LOC_Os10g30100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g03710 LOC_Os04g43922 LOC_Os02g34570 LOC_Os01g66730 LOC_Os01g47256 LOC_Os04g35420 LOC_Os03g63720 LOC_Os09g07820 LOC_Os06g12990 LOC_Os05g06350 LOC_Os02g57070 More.. |
| Downstream Genes | LOC_Os12g03822 LOC_Os11g03990 LOC_Os11g20689 LOC_Os11g48090 LOC_Os10g35280 LOC_Os12g04010 LOC_Os12g21500 LOC_Os11g07500 LOC_Os11g04200 LOC_Os12g43600 LOC_Os12g38110 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g30100.1 |
| Rice Genome Annotation | LOC_Os10g30100.1 |
| Ricechip | LOC_Os10g30100.1 |
| KEGG | osa:9270208 dosa:Os10t0437200-01 |
| Entrez-Gene | 9270208 |