RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g30290.1 View Network Show in Genome Browser |
| Other Names | Os10g0438600 |
| Description | GDSL-like lipase/acylhydrolase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 15734082-15736908 Nucleotide Length: 1077 |
| Protein-coding | LOC_Os10g30290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g10190 LOC_Os05g02060 LOC_Os07g43390 LOC_Os07g44180 LOC_Os04g44650 LOC_Os02g42570 LOC_Os01g53240 LOC_Os03g32790 LOC_Os10g22590 LOC_Os04g48350 LOC_Os02g45450 More.. |
| Downstream Genes | LOC_Os12g24580 LOC_Os12g37650 LOC_Os12g02340 LOC_Os12g02310 LOC_Os11g02424 LOC_Os11g02369 LOC_Os11g02400 LOC_Os11g47730 LOC_Os12g02330 LOC_Os11g02389 LOC_Os11g24070 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1848 |
| Pathways | |
|---|---|
| Metacyc Pathways | LIPAS-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g30290.1 |
| Rice Genome Annotation | LOC_Os10g30290.1 |
| Ricechip | LOC_Os10g30290.1 |
| KEGG | osa:4348715 dosa:Os10t0438600-01 |
| Entrez-Gene | 4348715 |