RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g30520.1 View Network Show in Genome Browser |
| Other Names | Os10g0441800 |
| Description | ras-related protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 15869292-15873575 Nucleotide Length: 753 |
| Protein-coding | LOC_Os10g30520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g41060 LOC_Os02g22140 LOC_Os01g59790 LOC_Os05g51500 LOC_Os03g44780 LOC_Os08g10649 LOC_Os02g24134 LOC_Os06g10650 LOC_Os08g25060 LOC_Os07g16970 |
| Downstream Genes | LOC_Os11g41910 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2878-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g30520.1 |
| Rice Genome Annotation | LOC_Os10g30520.1 |
| Ricechip | LOC_Os10g30520.1 |
| KEGG | osa:4348725 dosa:Os10t0441800-01 |
| Entrez-Gene | 4348725 |