RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g30540.1 View Network Show in Genome Browser |
| Other Names | Os10g0442000 |
| Description | lectin-like receptor kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 15877678-15880058 Nucleotide Length: 2124 |
| Protein-coding | LOC_Os10g30540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02600 LOC_Os06g09340 LOC_Os03g29850 LOC_Os02g41500 LOC_Os04g12580 LOC_Os04g12560 LOC_Os01g26174 LOC_Os03g07820 LOC_Os07g32380 LOC_Os03g35600 LOC_Os02g05630 More.. |
| Downstream Genes | LOC_Os10g39540 LOC_Os11g13820 LOC_Os12g41890 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1432-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g30540.1 |
| Rice Genome Annotation | LOC_Os10g30540.1 |
| Ricechip | LOC_Os10g30540.1 |
| KEGG | osa:4348727 dosa:Os10t0442000-01 |
| Entrez-Gene | 4348727 |