RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g30580.2 View Network Show in Genome Browser |
| Other Names | Os10g0442600 |
| Description | cell division control protein 48 homolog E, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 15914701-15915920 Nucleotide Length: 588 |
| Protein-coding | LOC_Os10g30580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g08480 LOC_Os06g07140 LOC_Os04g39040 LOC_Os06g07978 LOC_Os06g07878 LOC_Os02g37000 LOC_Os07g42632 LOC_Os09g27270 LOC_Os06g49140 LOC_Os05g49230 LOC_Os03g60750 More.. |
| Downstream Genes | LOC_Os10g36860 LOC_Os12g28177 LOC_Os12g28137 LOC_Os12g28590 LOC_Os12g28550 LOC_Os12g25710 LOC_Os12g44190 LOC_Os12g24320 LOC_Os12g28710 LOC_Os12g28460 LOC_Os11g05730 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g30580.2 |
| Rice Genome Annotation | LOC_Os10g30580.2 |
| Ricechip | LOC_Os10g30580.2 |
| KEGG | osa:4348731 dosa:Os10t0442600-01 |
| Entrez-Gene | 4348731 |