RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g30640.1 View Network Show in Genome Browser |
| Other Names | Os10g0443200 |
| Description | translin, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 15946256-15950087 Nucleotide Length: 894 |
| Protein-coding | LOC_Os10g30640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16100 LOC_Os07g32390 LOC_Os01g42040 LOC_Os01g36390 LOC_Os07g32480 LOC_Os02g47150 LOC_Os03g05300 LOC_Os02g44810 LOC_Os03g06670 LOC_Os02g56130 LOC_Os04g47580 More.. |
| Downstream Genes | LOC_Os12g39210 LOC_Os11g42420 LOC_Os12g31810 LOC_Os12g07720 LOC_Os11g36050 LOC_Os11g29390 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g30640.1 |
| Rice Genome Annotation | LOC_Os10g30640.1 |
| Ricechip | LOC_Os10g30640.1 |
| KEGG | osa:4348736 dosa:Os10t0443200-01 |
| Entrez-Gene | 4348736 |